User contributions
(newest | oldest) View (newer 100 | older 100) (20 | 50 | 100 | 250 | 500)
- 16:49, 3 August 2016 (diff | hist) . . (0) . . RAxML
- 16:47, 3 August 2016 (diff | hist) . . (+190) . . N RAxML (Created page with "= Introduction = Alexis Stamatakis' phylogeneitc tree builder = Example usage = raxml -m GTRGAMMA -s <alignment_of_sequences> -n <chosen_postfix_for_results> -t <sequence_...")
- 16:23, 3 August 2016 (diff | hist) . . (+12) . . Main Page
- 14:29, 3 August 2016 (diff | hist) . . (+1) . . Admin Tips
- 14:29, 3 August 2016 (diff | hist) . . (+886) . . Admin Tips
- 14:28, 3 August 2016 (diff | hist) . . (+817) . . H: drive on cluster
- 13:11, 3 August 2016 (diff | hist) . . (+220) . . H: drive on cluster
- 12:09, 3 August 2016 (diff | hist) . . (+415) . . Admin Tips
- 11:45, 3 August 2016 (diff | hist) . . (+708) . . Admin Tips
- 17:44, 2 August 2016 (diff | hist) . . (+321) . . N Environment-modules (Created page with "* the manually compiled version of environment-modules in marvin is found in /usr/local/Modules. It is a little buggy. Principally it cannot unload modules from with a module...")
- 17:39, 2 August 2016 (diff | hist) . . (+26) . . Main Page
- 17:31, 2 August 2016 (diff | hist) . . (+179) . . Frontend Restart
- 17:28, 2 August 2016 (diff | hist) . . (+414) . . Frontend Restart
- 17:23, 2 August 2016 (diff | hist) . . (+2) . . Frontend Restart
- 17:19, 2 August 2016 (diff | hist) . . (+926) . . Frontend Restart
- 17:07, 2 August 2016 (diff | hist) . . (+70) . . Frontend Restart
- 17:04, 2 August 2016 (diff | hist) . . (+1,560) . . Frontend Restart
- 16:12, 2 August 2016 (diff | hist) . . (+641) . . Frontend Restart
- 13:12, 1 August 2016 (diff | hist) . . (+318) . . BUSCO
- 13:07, 1 August 2016 (diff | hist) . . (+6) . . BUSCO
- 12:30, 1 August 2016 (diff | hist) . . (+111) . . Frontend Restart
- 12:29, 1 August 2016 (diff | hist) . . (+550) . . Frontend Restart
- 16:53, 29 July 2016 (diff | hist) . . (+12) . . Main Page
- 16:50, 29 July 2016 (diff | hist) . . (+202) . . Srst2
- 16:47, 29 July 2016 (diff | hist) . . (+209) . . Srst2
- 16:10, 29 July 2016 (diff | hist) . . (+699) . . Srst2
- 15:21, 29 July 2016 (diff | hist) . . (+423) . . Srst2
- 12:28, 29 July 2016 (diff | hist) . . (+1) . . Srst2
- 12:27, 29 July 2016 (diff | hist) . . (+99) . . Srst2
- 10:20, 29 July 2016 (diff | hist) . . (+101) . . Srst2
- 15:46, 28 July 2016 (diff | hist) . . (+183) . . H: drive on cluster
- 15:43, 28 July 2016 (diff | hist) . . (+88) . . H: drive on cluster
- 15:43, 28 July 2016 (diff | hist) . . (+60) . . N H: drive on cluster (Created page with "Has something to do with gvfs a gvfs daemon must be running")
- 15:42, 28 July 2016 (diff | hist) . . (+26) . . Main Page
- 14:11, 28 July 2016 (diff | hist) . . (+283) . . Stacks
- 17:16, 27 July 2016 (diff | hist) . . (-4) . . BUSCO
- 17:16, 27 July 2016 (diff | hist) . . (+321) . . BUSCO
- 17:06, 27 July 2016 (diff | hist) . . (+90) . . BUSCO
- 17:04, 27 July 2016 (diff | hist) . . (0) . . BUSCO
- 16:33, 27 July 2016 (diff | hist) . . (+2) . . BUSCO
- 16:32, 27 July 2016 (diff | hist) . . (+875) . . BUSCO
- 16:02, 27 July 2016 (diff | hist) . . (+771) . . BUSCO
- 15:35, 27 July 2016 (diff | hist) . . (+1) . . Augustus (current)
- 15:35, 27 July 2016 (diff | hist) . . (+325) . . Augustus
- 15:30, 27 July 2016 (diff | hist) . . (+60) . . BUSCO
- 13:41, 27 July 2016 (diff | hist) . . (+245) . . BUSCO
- 12:25, 27 July 2016 (diff | hist) . . (+301) . . BUSCO
- 12:21, 27 July 2016 (diff | hist) . . (+161) . . BUSCO
- 11:31, 27 July 2016 (diff | hist) . . (+508) . . BUSCO
- 11:09, 27 July 2016 (diff | hist) . . (+180) . . BUSCO
- 10:40, 27 July 2016 (diff | hist) . . (+129) . . BUSCO
- 10:31, 27 July 2016 (diff | hist) . . (+196) . . BUSCO
- 10:02, 27 July 2016 (diff | hist) . . (+22) . . BUSCO
- 10:00, 27 July 2016 (diff | hist) . . (+58) . . BUSCO
- 18:31, 26 July 2016 (diff | hist) . . (+238) . . BUSCO
- 18:30, 26 July 2016 (diff | hist) . . (+1) . . Augustus
- 18:29, 26 July 2016 (diff | hist) . . (+245) . . Augustus
- 17:25, 26 July 2016 (diff | hist) . . (+18) . . Augustus
- 15:39, 26 July 2016 (diff | hist) . . (+222) . . N Augustus (Created page with "= Introduction = Worthy gene prediction program from Mario Stanke at Greifenswald. = Admin notes only= == Compilation == Is a simple "make" but the Makefiles (especially t...")
- 15:37, 26 July 2016 (diff | hist) . . (+15) . . Main Page
- 13:05, 26 July 2016 (diff | hist) . . (+10) . . BUSCO
- 11:09, 22 July 2016 (diff | hist) . . (+302) . . BUSCO
- 11:04, 22 July 2016 (diff | hist) . . (+340) . . N BUSCO (Created page with "= Introduction = BUSCO, like Cegma, is a special tool for the field of "completeness assessment". This concerns genome assemblies, particularly ones generated de-novo, when b...")
- 10:57, 22 July 2016 (diff | hist) . . (+12) . . Main Page
- 17:13, 21 July 2016 (diff | hist) . . (-2) . . Cegma (current)
- 17:11, 21 July 2016 (diff | hist) . . (+5,160) . . N Cegma (Created page with " = How to use Cegma= By default, Cegma expects that you will only analyse one fasta sequence each time. So it has certain standard names for its output files which '''do not...")
- 17:09, 21 July 2016 (diff | hist) . . (+12) . . Main Page
- 08:18, 20 July 2016 (diff | hist) . . (+103) . . Srst2
- 17:13, 19 July 2016 (diff | hist) . . (+10) . . Srst2
- 17:12, 19 July 2016 (diff | hist) . . (+825) . . Srst2
- 16:55, 19 July 2016 (diff | hist) . . (+95) . . Srst2
- 15:59, 19 July 2016 (diff | hist) . . (+18) . . Srst2
- 15:58, 19 July 2016 (diff | hist) . . (-35) . . Srst2
- 15:50, 19 July 2016 (diff | hist) . . (+182) . . Srst2
- 15:15, 19 July 2016 (diff | hist) . . (+42) . . Patric (→Introduction) (current)
- 15:15, 19 July 2016 (diff | hist) . . (+754) . . N Patric (Created page with "= Introduction = = Guide = * Registering for Patric is a good idea. * When browsing you have an implicit workspace. You add items to it if you are interested in them. * The...")
- 15:07, 19 July 2016 (diff | hist) . . (+1) . . Main Page
- 15:07, 19 July 2016 (diff | hist) . . (+50) . . Main Page
- 18:01, 18 July 2016 (diff | hist) . . (+92) . . Miseq Prokaryote FASTQ analysis (current)
- 17:47, 18 July 2016 (diff | hist) . . (+22) . . Miseq Prokaryote FASTQ analysis
- 17:46, 18 July 2016 (diff | hist) . . (+262) . . Miseq Prokaryote FASTQ analysis
- 17:43, 18 July 2016 (diff | hist) . . (+9) . . Miseq Prokaryote FASTQ analysis
- 17:40, 18 July 2016 (diff | hist) . . (+20) . . Miseq Prokaryote FASTQ analysis
- 17:29, 18 July 2016 (diff | hist) . . (+2) . . Miseq Prokaryote FASTQ analysis
- 17:27, 18 July 2016 (diff | hist) . . (+11) . . Miseq Prokaryote FASTQ analysis
- 17:26, 18 July 2016 (diff | hist) . . (+2) . . Miseq Prokaryote FASTQ analysis
- 17:24, 18 July 2016 (diff | hist) . . (+571) . . Miseq Prokaryote FASTQ analysis
- 17:16, 18 July 2016 (diff | hist) . . (0) . . Miseq Prokaryote FASTQ analysis
- 17:15, 18 July 2016 (diff | hist) . . (+581) . . N Miseq Prokaryote FASTQ analysis (Created page with "=Introduction= We have our own Miseq machine and each week a run is carried out (each run costs about £1000 in consumibles) from various samples. They are unloaded onto HDR...")
- 17:09, 18 July 2016 (diff | hist) . . (+38) . . Main Page
- 17:55, 13 July 2016 (diff | hist) . . (+3) . . Srst2
- 18:39, 7 July 2016 (diff | hist) . . (+169) . . SPAdes
- 16:43, 6 July 2016 (diff | hist) . . (+2,538) . . FASTQC and MultiQC
- 16:43, 6 July 2016 (diff | hist) . . (+183) . . FASTQC and MultiQC
- 16:32, 6 July 2016 (diff | hist) . . (+5,010) . . N FASTQC and MultiQC (Created page with "=Introduction= Quality visualization = Help file = SYNOPSIS fastqc seqfile1 seqfile2 .. seqfileN fastqc [-o output dir] [--(no)extract] [-f fastq|bam|sam] [-c...")
- 16:32, 6 July 2016 (diff | hist) . . (+12) . . Main Page
- 15:44, 6 July 2016 (diff | hist) . . (+1) . . FASTQC (current)
- 15:44, 6 July 2016 (diff | hist) . . (+1) . . FASTQC
- 15:43, 6 July 2016 (diff | hist) . . (-7) . . FASTQC
- 15:43, 6 July 2016 (diff | hist) . . (+5,015) . . N FASTQC (Created page with "=Introduction= Quality visualization = Help file = SYNOPSIS fastqc seqfile1 seqfile2 .. seqfileN fastqc [-o output dir] [--(no)extract] [-f fastq|bam|sam]...")
(newest | oldest) View (newer 100 | older 100) (20 | 50 | 100 | 250 | 500)