Kennedy manual

• quick start

1. creating ssh keys and logging on
2. logging on to Kennedy

• pull and push to to and from MARVIN

• filezilla data transfer

• slurm commands

• submit a job and monitor queues

• samba like connection

• Conda

CONDA: http://stab.st-andrews.ac.uk/wiki/index.php/Conda#conda
Training: github.com/peterthorpe5/Sys_admin/tree/master/cluster_course

Note: on Kennedy, you may need to make programs executable to run. This is a know bug. Locate where the install have just gone, move to that directory and run chmod u+x prog_of_interest. The error that idicates something like this is:

libptf77blas.so.3: cannot open shared object file

syntax highlighting in Nano

do the following

cp /gpfs1/apps/kennedy_sys_admin/misc/.nanorc ./