WIP for progressing to user-centric conda installs
We are testing Bioconda on Marvin on a per user basis, so you have total control over it. Log in and from the command line type:
Either log out and back in or type:
We strongly advise using environments: https://conda.io/docs/user-guide/tasks/manage-environments.html . You can do this in many ways. Please see the link for more details (here you can specifiy eact version etc ..). The easiest usage would be: e.g. conda create -n NAME_OF_ENV PACKAGE_TO_INSTALL
conda create -n roary roary conda activate roary conda update roary
You are now ready to use this package.
Conda deactivate to leave this environment.
This works for me and a test user. But may fail for you, so be patient with us.
To list all the environments you have created:
conda info –envs
installing packages: https://bioconda.github.io/recipes.html