User contributions
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- 12:59, 12 June 2017 (diff | hist) . . (+16) . . Main Page
- 11:01, 6 June 2017 (diff | hist) . . (+59) . . Thor
- 10:59, 6 June 2017 (diff | hist) . . (+1,660) . . Thor
- 10:21, 6 June 2017 (diff | hist) . . (+94) . . Thor
- 10:18, 6 June 2017 (diff | hist) . . (+2,081) . . Thor
- 17:15, 5 June 2017 (diff | hist) . . (-2,420) . . Macs2
- 17:12, 5 June 2017 (diff | hist) . . (+3,157) . . Macs2
- 17:05, 5 June 2017 (diff | hist) . . (+124) . . Macs2
- 16:54, 5 June 2017 (diff | hist) . . (0) . . Main Page
- 16:53, 5 June 2017 (diff | hist) . . (+43) . . Blat (current)
- 16:52, 5 June 2017 (diff | hist) . . (+768) . . N Blat (Created page with "= Introduction = BLAT is a tool from Jim Kent's stable at UCSD. In purpose it is very close to NCBI's BLAST, but it generally is easier in terms of switches and input options...")
- 16:42, 5 June 2017 (diff | hist) . . (+12) . . Main Page
- 16:23, 5 June 2017 (diff | hist) . . (+306) . . Thor
- 16:19, 5 June 2017 (diff | hist) . . (+462) . . Thor
- 14:33, 5 June 2017 (diff | hist) . . (+2,009) . . N Thor (Created page with "= Introduction = This is one of the newer Differential Peak callers from Costalab in Aachen. = Usage = == a first run == The first few runs are usually error-prone. Thor i...")
- 14:16, 5 June 2017 (diff | hist) . . (+12) . . Main Page
- 13:54, 5 June 2017 (diff | hist) . . (+50) . . m Macs2
- 11:53, 5 June 2017 (diff | hist) . . (+6,446) . . Macs2
- 09:49, 1 June 2017 (diff | hist) . . (0) . . ChIP-Seq Top2 peak-calling
- 16:41, 31 May 2017 (diff | hist) . . (+429) . . ChIP-Seq Top2 peak-calling
- 16:12, 30 May 2017 (diff | hist) . . (+173) . . Bwa (current)
- 15:29, 30 May 2017 (diff | hist) . . (-5) . . ChIP-Seq Top2 peak-calling
- 15:14, 30 May 2017 (diff | hist) . . (+2,521) . . ChIP-Seq Top2 peak-calling
- 14:55, 30 May 2017 (diff | hist) . . (0) . . ChIP-Seq Top2 peak-calling
- 14:54, 30 May 2017 (diff | hist) . . (+1,148) . . ChIP-Seq Top2 peak-calling
- 14:50, 30 May 2017 (diff | hist) . . (+194) . . N ChIP-Seq Top2 peak-calling (Created page with "= Introduction = = Raw data description = = Raw dataset quality analysis = Using FASTQC and them MultiQC. Results linked [http:stab.st-andrews.ac.uk/stab/top2/fastqc.html...")
- 14:29, 30 May 2017 (diff | hist) . . (+33) . . Main Page (→Pipelines)
- 17:49, 22 May 2017 (diff | hist) . . (+3,216) . . N Macs2 (Created page with "= Introduction = One of the main programs used for peak-calling on ChIP-Seq alignments. = Usage = == Help file == Here is the programs help file obtained with the command...")
- 17:45, 22 May 2017 (diff | hist) . . (+13) . . Main Page
- 15:09, 14 May 2017 (diff | hist) . . (+13) . . Quality of Mapping Exercise (current)
- 15:05, 14 May 2017 (diff | hist) . . (+203) . . Quality Control and Preprocessing Exercise (current)
- 15:02, 14 May 2017 (diff | hist) . . (+148) . . Mapping to Reference Exercise (current)
- 14:49, 14 May 2017 (diff | hist) . . (+46) . . Quality of Mapping Exercise
- 14:46, 14 May 2017 (diff | hist) . . (+24) . . Quality of Mapping Exercise
- 23:34, 11 May 2017 (diff | hist) . . (-9) . . Functional Analysis Talk (current)
- 23:32, 11 May 2017 (diff | hist) . . (-31) . . Functional Analysis Talk
- 23:28, 11 May 2017 (diff | hist) . . (+2,170) . . N Functional Analysis Talk (Created page with "= Why do functional analysis? = * Statistical significance is not the same as biological significance * Variety of methods available to compare functional annotation to gene...")
- 23:24, 11 May 2017 (diff | hist) . . (0) . . N File:Gseawind.png (Uploaded with SimpleBatchUpload) (current)
- 23:24, 11 May 2017 (diff | hist) . . (0) . . N File:Rankintro.png (Uploaded with SimpleBatchUpload) (current)
- 23:24, 11 May 2017 (diff | hist) . . (0) . . N File:Fourcol.png (Uploaded with SimpleBatchUpload) (current)
- 23:24, 11 May 2017 (diff | hist) . . (0) . . N File:Highen.png (Uploaded with SimpleBatchUpload) (current)
- 23:24, 11 May 2017 (diff | hist) . . (0) . . N File:Line2.png (Uploaded with SimpleBatchUpload) (current)
- 23:24, 11 May 2017 (diff | hist) . . (0) . . N File:Nulldist.png (Uploaded with SimpleBatchUpload) (current)
- 23:24, 11 May 2017 (diff | hist) . . (0) . . N File:Eachgs.png (Uploaded with SimpleBatchUpload) (current)
- 23:24, 11 May 2017 (diff | hist) . . (0) . . N File:Line1.png (Uploaded with SimpleBatchUpload) (current)
- 23:24, 11 May 2017 (diff | hist) . . (0) . . N File:Line3.png (Uploaded with SimpleBatchUpload) (current)
- 21:45, 11 May 2017 (diff | hist) . . (+841) . . Estimating Gene Count Exercise (current)
- 21:35, 11 May 2017 (diff | hist) . . (+404) . . Visualisation of mapped reads (current)
- 21:16, 11 May 2017 (diff | hist) . . (+868) . . Quality of Mapping Exercise
- 19:29, 11 May 2017 (diff | hist) . . (+293) . . I2rda Course Cheatsheet (current)
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