User contributions
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- 18:04, 5 September 2016 (diff | hist) . . (+1,038) . . Queue Manager Tips
- 18:02, 5 September 2016 (diff | hist) . . (+255) . . Son of Gridengine
- 17:05, 5 September 2016 (diff | hist) . . (+121) . . Son of Gridengine
- 16:45, 5 September 2016 (diff | hist) . . (+471) . . Son of Gridengine
- 15:47, 5 September 2016 (diff | hist) . . (+84) . . Son of Gridengine
- 15:40, 5 September 2016 (diff | hist) . . (+155) . . Son of Gridengine
- 15:38, 5 September 2016 (diff | hist) . . (+253) . . Son of Gridengine
- 15:33, 5 September 2016 (diff | hist) . . (+846) . . N Son of Gridengine (Created page with "= Introduction = After Oracle bought Sun and then shut-sourced the Sun Grid Engine, Open Grid Engine made a release based SGEv5 in 2012 which hey called GE2011. However there...")
- 15:02, 5 September 2016 (diff | hist) . . (+24) . . Main Page
- 13:34, 2 September 2016 (diff | hist) . . (+18) . . Available Software
- 13:33, 2 September 2016 (diff | hist) . . (0) . . N File:Sw2.png (current)
- 17:03, 1 September 2016 (diff | hist) . . (+139) . . SSPACE
- 16:12, 1 September 2016 (diff | hist) . . (0) . . SSPACE
- 16:11, 1 September 2016 (diff | hist) . . (+10,368) . . SSPACE
- 16:07, 1 September 2016 (diff | hist) . . (+225) . . GapFiller (current)
- 16:05, 1 September 2016 (diff | hist) . . (+6,875) . . GapFiller
- 15:42, 1 September 2016 (diff | hist) . . (+383) . . N GapFiller (Created page with "= Introduction = De-novo assembly improvement software from Baseclear. This software should be run hand-in-hand with the SSPACE software, and it should be run afterwards....")
- 15:37, 1 September 2016 (diff | hist) . . (+16) . . Main Page
- 15:32, 1 September 2016 (diff | hist) . . (+492) . . SSPACE
- 15:27, 1 September 2016 (diff | hist) . . (+182) . . N SSPACE (Created page with "= Introduction = Software from Baseclear for improving N50 on de-novo assemblies. = Usage = SSPACE.pl -l libraries.txt -s contigs_abyss.fasta -k 5 -a 0.7 -x 0 -b ecoli_sca...")
- 15:20, 1 September 2016 (diff | hist) . . (+1) . . Available Software
- 15:20, 1 September 2016 (diff | hist) . . (-299) . . Available Software
- 14:54, 1 September 2016 (diff | hist) . . (+8,574) . . N Available Software (Created page with "= Introduction = The cluster uses the widely used Environment Modules system to manage the wide range of software available for Bioinformatics. It attempts to take care of th...")
- 14:36, 1 September 2016 (diff | hist) . . (+4) . . Main Page
- 14:35, 1 September 2016 (diff | hist) . . (+47) . . Main Page
- 17:54, 30 August 2016 (diff | hist) . . (+262) . . N NCBI (Created page with "= Grabbing a reference genome for something = * Go to the NCBI website and choose "nucleotide" * conduct search, and choose a result that sounds promising * To get the FASTA f...") (current)
- 17:04, 30 August 2016 (diff | hist) . . (+11) . . Main Page
- 15:44, 29 August 2016 (diff | hist) . . (+196) . . Sra-tools
- 17:01, 26 August 2016 (diff | hist) . . (+257) . . Snpcallphylo (current)
- 17:00, 26 August 2016 (diff | hist) . . (+300) . . Snpcallphylo
- 16:39, 26 August 2016 (diff | hist) . . (+83) . . N Snpcallphylo (Created page with "= Introduction = Cosmika Goswami's pipeline for call SNPs on prokaryotic NGS data.")
- 16:38, 26 August 2016 (diff | hist) . . (+19) . . Main Page
- 15:37, 26 August 2016 (diff | hist) . . (0) . . Srst2
- 15:37, 26 August 2016 (diff | hist) . . (+61) . . Srst2
- 15:16, 26 August 2016 (diff | hist) . . (+517) . . Srst2
- 17:26, 25 August 2016 (diff | hist) . . (+2,414) . . Incident: Can't connect to BerkeleyDB (current)
- 13:29, 25 August 2016 (diff | hist) . . (-2) . . Incident: Can't connect to BerkeleyDB
- 18:40, 24 August 2016 (diff | hist) . . (+741) . . N Incident: Can't connect to BerkeleyDB (Created page with "= Introduction = On 23 August 2016, marvin main system partition ran out of space. This is normally catastrophic to all running services. However the system did not fall, jus...")
- 18:32, 24 August 2016 (diff | hist) . . (+44) . . Main Page
- 16:33, 19 August 2016 (diff | hist) . . (+141) . . RAxML
- 16:02, 19 August 2016 (diff | hist) . . (+4,146) . . H: drive on cluster
- 17:10, 18 August 2016 (diff | hist) . . (+2) . . H: drive on cluster
- 15:49, 18 August 2016 (diff | hist) . . (+398) . . Gubbins (current)
- 14:34, 18 August 2016 (diff | hist) . . (+196) . . Gubbins
- 14:16, 18 August 2016 (diff | hist) . . (+237) . . N Gubbins (Created page with " =Admin notes= The documentation mostly goes over installation via linuxbrew, and looks very convenient. However, linuxbrew is not designed wth clusters in mind, and despite...")
- 14:12, 18 August 2016 (diff | hist) . . (+14) . . Main Page
- 12:12, 18 August 2016 (diff | hist) . . (+350) . . Bioinformatics Wordpress Site
- 11:03, 18 August 2016 (diff | hist) . . (+373) . . N Bioinformatics Wordpress Site (Created page with " = Tips = * For convenience, it's best to operate on the site with two browser tabs, one or viewing after latest changes (i.e. refreshing the page) and a second for the edit...")
- 10:55, 18 August 2016 (diff | hist) . . (+36) . . Main Page
- 17:11, 10 August 2016 (diff | hist) . . (+68) . . Prokka (current)
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