All pages
- 6TB storage expansion
- Abacas
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- Albacore
- Allow user access to other peoples data
- Ansible
- Apple MAC people + Linux
- Archaeopteryx and Forester
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- Aspera
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- BLAST
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- Biolinux Source course
- Biotime machine
- Bisulfite Sequencing
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- Blast2go: b2g4pipe
- Blat
- Bottlenose dolphin population genomic analysis
- Bowtie
- Bowtie2
- Bwa
- CAFE
- CMake
- Calculating coverage
- CallSNPs.py
- Canu
- Cd-hit
- Cegma
- ChIP-Seq Top2 in Yeast
- ChIP-Seq Top2 in Yeast 07.11.2017
- ChIP-Seq Top2 in Yeast 12.09.2017
- ChIP-Seq Top2 peak-calling
- ChIP-Seq Top2 peak-calling E2
- Cheatsheets
- Clearing queue errors
- Clustal
- Cluster Manual
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- Conda
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- Course itself
- Cramtools
- Creating ssh keys and logging on
- DRMAA for further Gridengine automation
- Deeptools
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- Diamond
- Differential Expression Exercise
- Differential Expression Talk
- Directory Organization Exercise
- Disk management after shelf disk failure
- Disk usage
- ETE
- Ea-utils
- Edgen RNAseq
- Edgenl2g
- Emailing
- Ensembl
- Environment-modules
- Estimating Gen Count Exercise
- Estimating Gene Count Exercise
- Estimating Gene Count Talk
- Expanding Storage
- FASTQC
- FASTQC and MultiQC
- Filezilla data transfer
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- Frontend Restart
- Ftp
- Functional Analysis Exercise
- Functional Analysis Talk
- Galaxy Setup
- GapFiller
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- General Command-line Tips
- GenomeTools
- Globus gridftp
- Glossary
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- H: drive on cluster
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- Hdi2u S00
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- Hdi2u S25
- Hdi2u commandbased exercises
- Hdi2u dirorg exercise
- Hdi2u intro
- Hdi2u rendertotsv exercise
- Hdi2u session 1
- Home directories max-out incident 28.11.2016
- How to use the cluster training course
- I2rda Course Cheatsheet
- I2rda m2rx
- I2rdalinks
- IGSR/1000 Genomes
- ITUcourse
- Incident: Can't connect to BerkeleyDB
- Incorrect rebooting of marvin 19.09.2017
- Installing software on marvin
- Interproscan
- Intro to RNA-Seq Data Analysis Course
- Introduction to Unix 2017
- JBrowse
- Kallisto
- Kennedy manual
- KentUtils
- Key Aspects of R Exercise
- Last
- Lastz
- Ldap is not ldap
- Limiting users jobs
- Links
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- MUMmer
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- Mapping.py
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- Mapping to Reference Exercise
- Mapping to Reference Talk
- Marvin and IPMI (remote hardware control)
- Mash
- Maximum Likelihood
- Mega
- Memory repair glitch 16.02.2017
- Meryl
- Message of the day
- MicroRNA and Salmo Salar
- MicroRNAs
- MinION (Oxford Nanopore)
- MinION Coverage sensitivity analysis
- MinKNOW folders and log files
- Miseq Prokaryote FASTQ analysis
- Mobaxterm for Windows
- Mounting drives
- Mounting marvin remotely
- Mysql
- NCBI
- NanoSim
- New schedule
- Node1 issues
- Node9 network failure incident 16-20.03.2017
- Normalization
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- PASA
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- PIs storage sacrifice
- PairwiseCallSNPs
- Pandoc modified manual
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- Pull and push to to and from MARVIN
- Pyrad
- Python
- Python DRMAA
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- Qualimap
- Quality Control Preprocessing Talk
- Quality Control and Preprocessing Exercise
- Quality Control and Preprocessing Talk
- Quality and Control Preprocessing Talk
- Quality of Mapping Exercise
- Quality of Mapping Talk
- Quast
- Queue Manager : shell script command
- Queue Manager Tips
- Queue Manager emailing when jobs run
- Quick start
- R
- RAM and RAM slots
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- RNASeq library preparation
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- Restart a node)
- Rnammer
- Roary
- SAN disconnect incident 10.01.2017
- SAN relocation task
- SCAN-pc laptop
- SNP Analysis and phylogenetics
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- SWATH-MS Data Analysis
- Samba like connection
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- Sickle
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- Son of Gridengine
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- Synthetic Long reads
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- Updating BLAST databases
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- Visualisation of mapped reads
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- Why a Queue Manager?
- Windows network connect
- Windows users