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This program is also called megacc, the "cc" standing for "Computational Core"


A preparatory step is required for the configuration of the analysis, facilitated by the program megaproto. This is done via a Graphical User Interface. It produces a mao file which must then be fed to the main megacc program via the -a option.

A main run of the progra is as follows:

megacc -a reltime_ml_nucleotide.mao -d Examples/mtCDNA.meg -t Examples/mtCDNA.nwk -g groups.txt -c Examples/mtCDNACalibration.txt -o timetree.demo


tutorial in PDF format