User contributions
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- 15:33, 20 November 2017 (diff | hist) . . (+17) . . Node1 issues
- 16:04, 17 November 2017 (diff | hist) . . (+175) . . Canu (current)
- 14:48, 9 November 2017 (diff | hist) . . (+96) . . BLAST (current)
- 16:49, 8 November 2017 (diff | hist) . . (+65) . . H: drive on cluster
- 16:47, 8 November 2017 (diff | hist) . . (+653) . . H: drive on cluster
- 16:17, 8 November 2017 (diff | hist) . . (+692) . . H: drive on cluster
- 11:53, 8 November 2017 (diff | hist) . . (+360) . . m ChIP-Seq Top2 in Yeast 07.11.2017
- 11:51, 8 November 2017 (diff | hist) . . (+8,329) . . N ChIP-Seq Top2 in Yeast 07.11.2017 (Created page with "= Introduction = Fourth set of ChIP-Seq samples from David @ Dundee. = Listing = Principle folder: '''071117HelderAmy''' Subfolder: 2017_11_01_19_Amy1_L001-ds.0b52f56e8cbc...")
- 11:44, 8 November 2017 (diff | hist) . . (+40) . . Main Page
- 16:13, 3 November 2017 (diff | hist) . . (+205) . . H: drive on cluster
- 13:43, 3 November 2017 (diff | hist) . . (+218) . . Normalization (current)
- 13:41, 3 November 2017 (diff | hist) . . (+597) . . N Normalization (Created page with "= Introduction = Normalisation can mean different things depending on the context, but can mostly be summarized by saying that, when undertaking comparisons, it is necessary...")
- 13:28, 3 November 2017 (diff | hist) . . (+20) . . Main Page
- 18:03, 2 November 2017 (diff | hist) . . (+143) . . Repeatmasker (current)
- 16:50, 2 November 2017 (diff | hist) . . (+51) . . Repeatmasker
- 16:45, 2 November 2017 (diff | hist) . . (+264) . . Repeatmasker
- 16:21, 2 November 2017 (diff | hist) . . (+2,630) . . Repeatmasker
- 16:08, 2 November 2017 (diff | hist) . . (+210) . . Repeatmasker
- 15:54, 2 November 2017 (diff | hist) . . (+60) . . Repeatmasker
- 15:21, 2 November 2017 (diff | hist) . . (+357) . . Repeatmasker
- 14:15, 2 November 2017 (diff | hist) . . (+4,980) . . Repeatmasker
- 14:49, 1 November 2017 (diff | hist) . . (+474) . . ChIP-Seq Top2 in Yeast
- 21:40, 30 October 2017 (diff | hist) . . (+166) . . H: drive on cluster
- 16:05, 22 October 2017 (diff | hist) . . (+8) . . VCF (current)
- 16:04, 22 October 2017 (diff | hist) . . (+197) . . VCF
- 13:05, 21 October 2017 (diff | hist) . . (+65) . . Nseg (current)
- 13:04, 21 October 2017 (diff | hist) . . (+292) . . N Nseg (Created page with "=Introduction = Coded in C and oldish utility software from NCBI. Information on this software is not easy to find. GACRC however, comes to the rescue: * Author / Distribut...")
- 12:59, 21 October 2017 (diff | hist) . . (+12) . . Main Page
- 13:48, 20 October 2017 (diff | hist) . . (+222) . . Repeatmodeler (current)
- 13:21, 20 October 2017 (diff | hist) . . (+271) . . Repeatmodeler
- 13:17, 20 October 2017 (diff | hist) . . (+552) . . Repeatmodeler
- 13:03, 20 October 2017 (diff | hist) . . (+353) . . Repeatmodeler
- 12:37, 20 October 2017 (diff | hist) . . (+3) . . Repeatmodeler
- 12:11, 20 October 2017 (diff | hist) . . (+597) . . Repeatmodeler
- 11:38, 20 October 2017 (diff | hist) . . (+1,964) . . Repeatmodeler
- 10:56, 20 October 2017 (diff | hist) . . (+294) . . Repeatmodeler
- 10:21, 20 October 2017 (diff | hist) . . (+57) . . Repeatmodeler
- 10:19, 20 October 2017 (diff | hist) . . (+540) . . Repeatmodeler
- 09:56, 20 October 2017 (diff | hist) . . (+122) . . Repeatmodeler
- 09:39, 20 October 2017 (diff | hist) . . (+193) . . N Repeatmodeler (Created page with "= Introdcuction = = Installation notes = nseg and nmerge (included in nseg) are quite old programs coded in C by NCBI. These were installed on all machines in /usr/local/bi...")
- 09:30, 20 October 2017 (diff | hist) . . (+21) . . Main Page
- 14:19, 17 October 2017 (diff | hist) . . (+242) . . Biotime machine
- 14:07, 17 October 2017 (diff | hist) . . (+426) . . Biotime machine
- 13:47, 17 October 2017 (diff | hist) . . (+469) . . Biotime machine
- 13:38, 17 October 2017 (diff | hist) . . (+145) . . Biotime machine
- 13:34, 17 October 2017 (diff | hist) . . (+203) . . Biotime machine
- 09:55, 17 October 2017 (diff | hist) . . (+106) . . MinION (Oxford Nanopore) (current)
- 10:45, 16 October 2017 (diff | hist) . . (+113) . . SCAN-pc laptop (current)
- 10:36, 16 October 2017 (diff | hist) . . (+168) . . SCAN-pc laptop
- 10:31, 16 October 2017 (diff | hist) . . (+430) . . SCAN-pc laptop
- 11:59, 11 October 2017 (diff | hist) . . (+87) . . Bisulfite Sequencing (current)
- 11:57, 11 October 2017 (diff | hist) . . (+166) . . N Bisulfite Sequencing (Created page with "= Introduction = Sequencing which causes unmethylated cytosine to be repaced by uracil. In this way, the methylation (which silences genes) pattern can be detected.")
- 11:54, 11 October 2017 (diff | hist) . . (-1) . . Main Page
- 11:54, 11 October 2017 (diff | hist) . . (+27) . . Main Page
- 22:10, 9 October 2017 (diff | hist) . . (-1) . . ChIP-Seq Top2 in Yeast
- 21:51, 9 October 2017 (diff | hist) . . (+301) . . ChIP-Seq Top2 in Yeast
- 21:31, 9 October 2017 (diff | hist) . . (+133) . . ChIP-Seq Top2 in Yeast
- 21:26, 9 October 2017 (diff | hist) . . (+264) . . ChIP-Seq Top2 in Yeast
- 16:39, 9 October 2017 (diff | hist) . . (+286) . . ChIP-Seq Top2 in Yeast
- 16:34, 9 October 2017 (diff | hist) . . (+414) . . ChIP-Seq Top2 in Yeast
- 16:19, 9 October 2017 (diff | hist) . . (0) . . ChIP-Seq Top2 in Yeast
- 16:13, 9 October 2017 (diff | hist) . . (+332) . . ChIP-Seq Top2 in Yeast
- 15:49, 9 October 2017 (diff | hist) . . (+157) . . GenomeTools (current)
- 12:31, 9 October 2017 (diff | hist) . . (+552) . . GenomeTools
- 10:05, 9 October 2017 (diff | hist) . . (+143) . . GenomeTools
- 10:47, 6 October 2017 (diff | hist) . . (+1) . . Banjo (current)
- 09:27, 6 October 2017 (diff | hist) . . (+84) . . CallSNPs.py (current)
- 09:09, 6 October 2017 (diff | hist) . . (+172) . . CallSNPs.py
- 09:07, 6 October 2017 (diff | hist) . . (+250) . . Banjo
- 08:10, 6 October 2017 (diff | hist) . . (+149) . . MicroRNAs
- 16:36, 5 October 2017 (diff | hist) . . (+64) . . ViennaRNA (current)
- 16:35, 5 October 2017 (diff | hist) . . (+65) . . Squid (current)
- 16:26, 5 October 2017 (diff | hist) . . (+223) . . Squid
- 16:24, 5 October 2017 (diff | hist) . . (+1) . . BLAST
- 16:23, 5 October 2017 (diff | hist) . . (+1,031) . . BLAST
- 13:30, 5 October 2017 (diff | hist) . . (+348) . . N Squid (Created page with "= Introduction = In the wide world of software, squid is a proxy server used in high traffic websites, but this squid is Sean Eddy's utilites for general sequence reading. I...")
- 13:28, 5 October 2017 (diff | hist) . . (+13) . . Main Page
- 12:36, 5 October 2017 (diff | hist) . . (-1) . . Perl (current)
- 12:35, 5 October 2017 (diff | hist) . . (+461) . . Perl
- 12:09, 5 October 2017 (diff | hist) . . (+25) . . Perl
- 12:08, 5 October 2017 (diff | hist) . . (+398) . . Perl
- 11:19, 5 October 2017 (diff | hist) . . (+369) . . ViennaRNA
- 11:17, 5 October 2017 (diff | hist) . . (0) . . Perl
- 11:16, 5 October 2017 (diff | hist) . . (+94) . . Perl
- 11:08, 5 October 2017 (diff | hist) . . (+417) . . N Perl (Created page with "= Introduction = Quite a large software package for dealing with RNA and RNA structure = Installation = New versions of perl follow this configuraion before compiling sh...")
- 11:03, 5 October 2017 (diff | hist) . . (+210) . . N ViennaRNA (Created page with "= Introduction = Quite a large software package for dealing with RNA and RNA structure = Installation = ViennaRNA has a perl interface as well as a python interface for bot...")
- 10:53, 5 October 2017 (diff | hist) . . (+32) . . Main Page
- 13:26, 4 October 2017 (diff | hist) . . (+314) . . MicroRNAs
- 13:14, 4 October 2017 (diff | hist) . . (+203) . . N MicroRNAs (Created page with "= Introduction = = Relevant Papers = == "Predicting effective microRNA target sites in mammalian mRNAs" == By Agarwal et al eLife 2015 , link [https://www.ncbi.nlm.nih.gov/p...")
- 13:09, 4 October 2017 (diff | hist) . . (+16) . . Main Page
- 16:30, 3 October 2017 (diff | hist) . . (+79) . . Banjo
- 16:23, 3 October 2017 (diff | hist) . . (+588) . . N Banjo (Created page with "= Introduction = Banjo is Bayesian Network software with a very range of applicability in terms of data sets. It is coded in java and can be activiated on the cluster with...")
- 16:18, 3 October 2017 (diff | hist) . . (+13) . . Main Page
- 09:11, 2 October 2017 (diff | hist) . . (+2,473) . . N ChIP-Seq Top2 in Yeast 12.09.2017 (Created page with "= Introduction = September 2017 sequencing of a series of datasets listed below = Raw dataset listing = * 2017_09_12_24_INP-56915985 2017-09-12-24-INP_S24_L001_R1_001.fast...")
- 09:08, 2 October 2017 (diff | hist) . . (+40) . . Main Page
- 08:52, 29 September 2017 (diff | hist) . . (-4) . . IGSR/1000 Genomes (current)
- 08:51, 29 September 2017 (diff | hist) . . (+336) . . IGSR/1000 Genomes
- 08:48, 29 September 2017 (diff | hist) . . (+122) . . N IGSR/1000 Genomes (Created page with "= Introduction = IGSR, the Internation Genome Sample Resource provides ongoing support for the 1000 Genomes Project data.")
- 08:46, 29 September 2017 (diff | hist) . . (+24) . . Main Page
- 12:52, 21 September 2017 (diff | hist) . . (+215) . . Roary (current)
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