User contributions
(newest | oldest) View (newer 100 | older 100) (20 | 50 | 100 | 250 | 500)
- 15:03, 5 May 2016 (diff | hist) . . (-12) . . Main Page
- 15:03, 5 May 2016 (diff | hist) . . (+12) . . Main Page
- 23:54, 4 May 2016 (diff | hist) . . (+209) . . JBrowse
- 23:52, 4 May 2016 (diff | hist) . . (+613) . . N JBrowse (Created page with "=Introduction= Quick Javascript based Genome Viewer = Using = Like other browsers, JBrowse simply gives a visual way of navigating a set of sequences. * Beside the magnify...")
- 23:45, 4 May 2016 (diff | hist) . . (+14) . . Main Page
- 15:24, 4 May 2016 (diff | hist) . . (+194) . . SPAdes
- 15:20, 4 May 2016 (diff | hist) . . (+34) . . N SPAdes (Created page with "= Introduction = Pavel Pevzsner's")
- 14:54, 4 May 2016 (diff | hist) . . (+13) . . Main Page
- 16:23, 1 May 2016 (diff | hist) . . (+637) . . N Cd-hit (Created page with "=Introduction= CD-HIT is primarily a clustering program which, for input, takes fasta sequence files which are being envisioned as databases against which query sequence file...") (current)
- 14:12, 1 May 2016 (diff | hist) . . (+13) . . Main Page
- 17:08, 29 April 2016 (diff | hist) . . (+140) . . Srst2
- 17:05, 29 April 2016 (diff | hist) . . (+197) . . Srst2
- 16:20, 29 April 2016 (diff | hist) . . (+403) . . N Queue Manager Tips (Created page with "= Pipe a jobscript to '''qsub'''= echo -e 'date; sleep 2; date' | qsub -cwd -j y -V -S /bin/bash -q all.q -N pipetest This will send a string with the command date, followe...")
- 16:13, 29 April 2016 (diff | hist) . . (+473) . . Main Page
- 15:14, 29 April 2016 (diff | hist) . . (+73) . . Srst2
- 15:11, 29 April 2016 (diff | hist) . . (+800) . . Srst2
- 14:58, 29 April 2016 (diff | hist) . . (+108) . . Srst2
- 14:57, 29 April 2016 (diff | hist) . . (+3) . . Srst2
- 14:55, 29 April 2016 (diff | hist) . . (+81) . . Srst2
- 14:49, 29 April 2016 (diff | hist) . . (+151) . . Srst2
- 14:46, 29 April 2016 (diff | hist) . . (+82) . . Srst2
- 14:44, 29 April 2016 (diff | hist) . . (+7) . . Srst2
- 14:35, 29 April 2016 (diff | hist) . . (+27) . . Srst2
- 14:33, 29 April 2016 (diff | hist) . . (+68) . . Srst2
- 14:26, 29 April 2016 (diff | hist) . . (+69) . . Srst2
- 14:25, 29 April 2016 (diff | hist) . . (+185) . . Srst2
- 14:08, 29 April 2016 (diff | hist) . . (+157) . . Srst2
- 13:32, 29 April 2016 (diff | hist) . . (+491) . . Srst2
- 17:25, 28 April 2016 (diff | hist) . . (+48) . . Srst2
- 17:22, 28 April 2016 (diff | hist) . . (+459) . . Srst2
- 17:16, 28 April 2016 (diff | hist) . . (+138) . . Srst2
- 17:09, 28 April 2016 (diff | hist) . . (+228) . . Srst2
- 17:05, 28 April 2016 (diff | hist) . . (+70) . . Srst2
- 17:03, 28 April 2016 (diff | hist) . . (+2) . . Srst2
- 17:01, 28 April 2016 (diff | hist) . . (+442) . . Srst2
- 16:35, 28 April 2016 (diff | hist) . . (+68) . . Srst2
- 16:20, 28 April 2016 (diff | hist) . . (+489) . . Srst2
- 15:35, 28 April 2016 (diff | hist) . . (+82) . . Srst2
- 15:22, 28 April 2016 (diff | hist) . . (+255) . . Srst2
- 15:12, 28 April 2016 (diff | hist) . . (+88) . . Srst2
- 15:11, 28 April 2016 (diff | hist) . . (+290) . . Srst2
- 17:53, 27 April 2016 (diff | hist) . . (+202) . . Srst2
- 17:48, 27 April 2016 (diff | hist) . . (+172) . . Srst2
- 11:34, 21 April 2016 (diff | hist) . . (+299) . . Diamond
- 18:39, 20 April 2016 (diff | hist) . . (+189) . . Pyrad (current)
- 18:36, 20 April 2016 (diff | hist) . . (+184) . . Pyrad
- 18:22, 20 April 2016 (diff | hist) . . (+142) . . Pyrad
- 18:20, 20 April 2016 (diff | hist) . . (+3) . . Pyrad
- 18:17, 20 April 2016 (diff | hist) . . (+42) . . Pyrad
- 18:16, 20 April 2016 (diff | hist) . . (+70) . . Pyrad
- 18:11, 20 April 2016 (diff | hist) . . (+134) . . Pyrad
- 18:08, 20 April 2016 (diff | hist) . . (+2) . . Pyrad
- 18:07, 20 April 2016 (diff | hist) . . (+5) . . Pyrad
- 18:06, 20 April 2016 (diff | hist) . . (+135) . . Pyrad
- 18:04, 20 April 2016 (diff | hist) . . (0) . . Pyrad
- 18:03, 20 April 2016 (diff | hist) . . (+35) . . Pyrad
- 18:03, 20 April 2016 (diff | hist) . . (+49) . . Pyrad
- 18:02, 20 April 2016 (diff | hist) . . (+134) . . Pyrad
- 17:58, 20 April 2016 (diff | hist) . . (+547) . . Pyrad
- 17:08, 20 April 2016 (diff | hist) . . (+37) . . N Pyrad (Created page with " The go-to tutorial for this is at: *")
- 16:02, 20 April 2016 (diff | hist) . . (+12) . . Main Page
- 17:52, 19 April 2016 (diff | hist) . . (+432) . . Stacks
- 14:33, 19 April 2016 (diff | hist) . . (+3) . . Stacks
- 14:33, 19 April 2016 (diff | hist) . . (+2) . . Stacks
- 14:32, 19 April 2016 (diff | hist) . . (+330) . . Stacks
- 14:05, 19 April 2016 (diff | hist) . . (+2) . . Stacks
- 14:05, 19 April 2016 (diff | hist) . . (+1) . . Stacks
- 14:04, 19 April 2016 (diff | hist) . . (+2) . . Stacks
- 14:03, 19 April 2016 (diff | hist) . . (+1) . . Stacks
- 14:03, 19 April 2016 (diff | hist) . . (+195) . . Stacks
- 13:53, 19 April 2016 (diff | hist) . . (+34) . . Stacks
- 13:52, 19 April 2016 (diff | hist) . . (+88) . . Stacks
- 14:58, 18 April 2016 (diff | hist) . . (+302) . . N Stacks (Created page with "Dominant Radseq analysis software protocol by Julian Catchen. =Steps= * create database * ensure $STACKSROOTDIR/share/stacks/sql/my.cnf is set up properly * ensure modificat...")
- 14:40, 18 April 2016 (diff | hist) . . (+13) . . Main Page
- 17:02, 8 April 2016 (diff | hist) . . (+85) . . Synthetic Long reads (current)
- 16:55, 8 April 2016 (diff | hist) . . (0) . . N File:Biopipe.png (current)
- 16:34, 8 April 2016 (diff | hist) . . (-134) . . Synthetic Long reads
- 16:33, 8 April 2016 (diff | hist) . . (+137) . . Synthetic Long reads
- 16:24, 8 April 2016 (diff | hist) . . (+477) . . Galaxy Setup (current)
- 16:12, 8 April 2016 (diff | hist) . . (+10) . . Synthetic Long reads
- 16:01, 8 April 2016 (diff | hist) . . (+1,617) . . N Synthetic Long reads (Created page with "NGS reads are short in that they found in the 50-200 base-pair length scale. Longer reads are seen as more powerful, so there is a general tendency towards longer reads which...")
- 15:09, 8 April 2016 (diff | hist) . . (+39) . . Main Page
- 15:06, 8 April 2016 (diff | hist) . . (+10) . . Cluster Manual
- 12:43, 8 April 2016 (diff | hist) . . (0) . . N File:Welc.png (current)
- 12:19, 8 April 2016 (diff | hist) . . (+53) . . Python (current)
- 23:55, 7 April 2016 (diff | hist) . . (+10,887) . . N Cluster Manual (Created page with "=Introduction= This manual provides a brief introduction to the usage of St. Andrews’s bioinformatics cluster which consists of the frontend which we call marvin and its te...")
- 23:52, 7 April 2016 (diff | hist) . . (+19) . . Main Page
- 23:15, 7 April 2016 (diff | hist) . . (-69) . . Main Page
- 23:12, 7 April 2016 (diff | hist) . . (+371) . . N Galaxy Setup (Created page with "Galaxy is easy to set up as single user on a laptop, because it's most probably devoid of currently webservices. In other words, the Peronsal edition is easy. O install on mu...")
- 21:11, 7 April 2016 (diff | hist) . . (+20) . . CallSNPs.py
- 13:53, 7 April 2016 (diff | hist) . . (+31) . . Main Page
- 18:48, 6 April 2016 (diff | hist) . . (0) . . File:Callsnppipe.png (Rf uploaded a new version of File:Callsnppipe.png) (current)
- 18:46, 6 April 2016 (diff | hist) . . (+24) . . Velvet
- 18:43, 6 April 2016 (diff | hist) . . (0) . . N File:Intleaved.png (current)
- 18:32, 6 April 2016 (diff | hist) . . (+439) . . Velvet
- 18:28, 6 April 2016 (diff | hist) . . (+18) . . Velvet
- 16:26, 4 April 2016 (diff | hist) . . (+51) . . CallSNPs.py
- 11:26, 4 April 2016 (diff | hist) . . (+84) . . CallSNPs.py (→Stages)
- 11:25, 4 April 2016 (diff | hist) . . (+4) . . CallSNPs.py
- 11:24, 4 April 2016 (diff | hist) . . (+20) . . CallSNPs.py (→Stages)
(newest | oldest) View (newer 100 | older 100) (20 | 50 | 100 | 250 | 500)