Difference between revisions of "ChIP-Seq Top2 in Yeast"

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(Created page with "= Introduction = This wiki page combines the two sequencing experiments of ChIP-Seq on yeast samples udring June / July 2017. * ChIP-Seq Top2 peak-calling * ChIP-Seq T...")
 
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* [http://stab.st-andrews.ac.uk/top2/bamquals0/ULSIP_E1_cad1tro_srtd_bamqc.html ULS1_IP_E1]
 
* [http://stab.st-andrews.ac.uk/top2/bamquals0/ULSIP_E1_cad1tro_srtd_bamqc.html ULS1_IP_E1]
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* [http://stab.st-andrews.ac.uk/top2/bamquals0/ULSINP_E1_cad1tro_srtd_bamqc.html ULS1_INP_E1]
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* [http://stab.st-andrews.ac.uk/top2/bamquals0/WTIP_E1_cad1tro_srtd_bamqc.html WT_IP_E1]
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* [http://stab.st-andrews.ac.uk/top2/bamquals0/WTINP_E1_cad1tro_srtd_bamqc.html WT_INP_E1]

Revision as of 18:23, 30 July 2017

Introduction

This wiki page combines the two sequencing experiments of ChIP-Seq on yeast samples udring June / July 2017.

Sample quality

The MACS2 program takes care of duplicates so samples were only trimmed for adapters and quality.

Bam quality