Bgenie

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Introduction

bgen file processor from Jonathan Marchini

Usage

to load up the software:

module load bgenie

typical use cases

(See the homepage n the Links section below for the tool for more precise details)

genie --bgen example.bgen --pheno example.pheno --out example.out
bgenie --bgen example.bgen --pheno example.pheno --out example.out --range 22 20000000 21000000
bgenie --bgen example.bgen --pheno example.pheno --out example.out --rsid rs573069994

Links