Snpcallphylo

Introduction

Cosmika Goswami's pipeline for call SNPs on prokaryotic NGS data.

Procedure

• It is best to create a dedicated folder/directory in which you will carry out your work
• Copy the snpcallphylo python executable into it and create two subfolders: input and output. You can also choose other names.
• either copy or symlink you data files into the input directory