Augustus

Introduction

Worthy gene prediction program from Mario Stanke at Greifenswald.

Contents

Augustus has many script available, and several executables besides the main "augustus" executable.

It also has a config directory available through the environmental variable $AUGUSTUS_CONFIG_DIR

Admin notes only

Compilation

Is a simple "make" but the Makefiles (especially the ne inside "src") need heavy editing.

filterBam particularly

colamd, got rid of this.