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Contents
1
Usage of Cluster
2
Programs
3
Pipelines
3.1
Protocols
3.2
Cluster Administration
Usage of Cluster
Cluster Manual
Programs
BLAST
blast2go: b2g4pipe
diamond
sra-tools
kallisto
python
velvet
srst2
bowtie2
stacks
pyrad
Pipelines
Trinity_Protocol
STAR BEAST
callSNPs.py
Protocols
Synthetic Long reads
Cluster Administration
Globus_gridftp
Galaxy Setup
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Discussion
Variants
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