Ariba

Introduction

Antimicrobial resistance software

Testing and usage

ariba getref card out.card
ariba prepareref -f out.card.fa -m out.card.tsv out.card.prepareref
ariba run out.card.prepareref reads1.fastq reads2.fastq out.run

Last line will fail because the reads are not provided.

Links

• Homepage of the project.