User contributions
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- 13:53, 19 April 2016 (diff | hist) . . (+34) . . Stacks
- 13:52, 19 April 2016 (diff | hist) . . (+88) . . Stacks
- 14:58, 18 April 2016 (diff | hist) . . (+302) . . N Stacks (Created page with "Dominant Radseq analysis software protocol by Julian Catchen. =Steps= * create database * ensure $STACKSROOTDIR/share/stacks/sql/my.cnf is set up properly * ensure modificat...")
- 14:40, 18 April 2016 (diff | hist) . . (+13) . . Main Page
- 17:02, 8 April 2016 (diff | hist) . . (+85) . . Synthetic Long reads (current)
- 16:55, 8 April 2016 (diff | hist) . . (0) . . N File:Biopipe.png (current)
- 16:34, 8 April 2016 (diff | hist) . . (-134) . . Synthetic Long reads
- 16:33, 8 April 2016 (diff | hist) . . (+137) . . Synthetic Long reads
- 16:24, 8 April 2016 (diff | hist) . . (+477) . . Galaxy Setup (current)
- 16:12, 8 April 2016 (diff | hist) . . (+10) . . Synthetic Long reads
- 16:01, 8 April 2016 (diff | hist) . . (+1,617) . . N Synthetic Long reads (Created page with "NGS reads are short in that they found in the 50-200 base-pair length scale. Longer reads are seen as more powerful, so there is a general tendency towards longer reads which...")
- 15:09, 8 April 2016 (diff | hist) . . (+39) . . Main Page
- 15:06, 8 April 2016 (diff | hist) . . (+10) . . Cluster Manual
- 12:43, 8 April 2016 (diff | hist) . . (0) . . N File:Welc.png (current)
- 12:19, 8 April 2016 (diff | hist) . . (+53) . . Python (current)
- 23:55, 7 April 2016 (diff | hist) . . (+10,887) . . N Cluster Manual (Created page with "=Introduction= This manual provides a brief introduction to the usage of St. Andrews’s bioinformatics cluster which consists of the frontend which we call marvin and its te...")
- 23:52, 7 April 2016 (diff | hist) . . (+19) . . Main Page
- 23:15, 7 April 2016 (diff | hist) . . (-69) . . Main Page
- 23:12, 7 April 2016 (diff | hist) . . (+371) . . N Galaxy Setup (Created page with "Galaxy is easy to set up as single user on a laptop, because it's most probably devoid of currently webservices. In other words, the Peronsal edition is easy. O install on mu...")
- 21:11, 7 April 2016 (diff | hist) . . (+20) . . CallSNPs.py
- 13:53, 7 April 2016 (diff | hist) . . (+31) . . Main Page
- 18:48, 6 April 2016 (diff | hist) . . (0) . . File:Callsnppipe.png (Rf uploaded a new version of File:Callsnppipe.png) (current)
- 18:46, 6 April 2016 (diff | hist) . . (+24) . . Velvet
- 18:43, 6 April 2016 (diff | hist) . . (0) . . N File:Intleaved.png (current)
- 18:32, 6 April 2016 (diff | hist) . . (+439) . . Velvet
- 18:28, 6 April 2016 (diff | hist) . . (+18) . . Velvet
- 16:26, 4 April 2016 (diff | hist) . . (+51) . . CallSNPs.py
- 11:26, 4 April 2016 (diff | hist) . . (+84) . . CallSNPs.py (→Stages)
- 11:25, 4 April 2016 (diff | hist) . . (+4) . . CallSNPs.py
- 11:24, 4 April 2016 (diff | hist) . . (+20) . . CallSNPs.py (→Stages)
- 11:21, 4 April 2016 (diff | hist) . . (0) . . N File:Callsnppipe.png
- 11:02, 4 April 2016 (diff | hist) . . (+3) . . CallSNPs.py
- 11:01, 4 April 2016 (diff | hist) . . (+64) . . CallSNPs.py (→Extract features with minimum coverage)
- 10:51, 4 April 2016 (diff | hist) . . (+43) . . CallSNPs.py
- 23:16, 3 April 2016 (diff | hist) . . (+70) . . CallSNPs.py (→Create fasta file from merged VCF file)
- 16:11, 3 April 2016 (diff | hist) . . (-12) . . CallSNPs.py (→Create fasta file from merged VCF file)
- 16:04, 3 April 2016 (diff | hist) . . (-34) . . CallSNPs.py
- 16:03, 3 April 2016 (diff | hist) . . (+176) . . CallSNPs.py (→9. Create fasta file from merged VCF file)
- 16:01, 3 April 2016 (diff | hist) . . (+25) . . CallSNPs.py (→9. Create fasta file from merged VCF file)
- 15:56, 3 April 2016 (diff | hist) . . (+227) . . CallSNPs.py
- 15:46, 3 April 2016 (diff | hist) . . (0) . . CallSNPs.py
- 15:45, 3 April 2016 (diff | hist) . . (+225) . . CallSNPs.py (→8. Merge VCF files)
- 15:38, 3 April 2016 (diff | hist) . . (+11) . . CallSNPs.py (→7. Filter recoded VCF file by quality expression)
- 15:37, 3 April 2016 (diff | hist) . . (+149) . . CallSNPs.py
- 15:25, 3 April 2016 (diff | hist) . . (+209) . . CallSNPs.py (→7. Filter recoded VCF file by quality expression)
- 15:23, 3 April 2016 (diff | hist) . . (+135) . . CallSNPs.py
- 15:12, 3 April 2016 (diff | hist) . . (+253) . . CallSNPs.py (→7. Merge recoded VCF files)
- 15:06, 3 April 2016 (diff | hist) . . (+179) . . CallSNPs.py
- 14:50, 3 April 2016 (diff | hist) . . (0) . . CallSNPs.py (→6. Merge vcf files to reflect common feature set)
- 14:50, 3 April 2016 (diff | hist) . . (+150) . . CallSNPs.py (→6. Merge vcf files to reflect common feature set)
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