User contributions
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- 16:03, 3 April 2016 (diff | hist) . . (+176) . . CallSNPs.py (→9. Create fasta file from merged VCF file)
- 16:01, 3 April 2016 (diff | hist) . . (+25) . . CallSNPs.py (→9. Create fasta file from merged VCF file)
- 15:56, 3 April 2016 (diff | hist) . . (+227) . . CallSNPs.py
- 15:46, 3 April 2016 (diff | hist) . . (0) . . CallSNPs.py
- 15:45, 3 April 2016 (diff | hist) . . (+225) . . CallSNPs.py (→8. Merge VCF files)
- 15:38, 3 April 2016 (diff | hist) . . (+11) . . CallSNPs.py (→7. Filter recoded VCF file by quality expression)
- 15:37, 3 April 2016 (diff | hist) . . (+149) . . CallSNPs.py
- 15:25, 3 April 2016 (diff | hist) . . (+209) . . CallSNPs.py (→7. Filter recoded VCF file by quality expression)
- 15:23, 3 April 2016 (diff | hist) . . (+135) . . CallSNPs.py
- 15:12, 3 April 2016 (diff | hist) . . (+253) . . CallSNPs.py (→7. Merge recoded VCF files)
- 15:06, 3 April 2016 (diff | hist) . . (+179) . . CallSNPs.py
- 14:50, 3 April 2016 (diff | hist) . . (0) . . CallSNPs.py (→6. Merge vcf files to reflect common feature set)
- 14:50, 3 April 2016 (diff | hist) . . (+150) . . CallSNPs.py (→6. Merge vcf files to reflect common feature set)
- 14:38, 3 April 2016 (diff | hist) . . (+50) . . CallSNPs.py (→6. Merge vcf files to reflect common feature set)
- 14:21, 3 April 2016 (diff | hist) . . (+342) . . CallSNPs.py (→6. Merge vcf files)
- 14:12, 3 April 2016 (diff | hist) . . (+427) . . CallSNPs.py
- 14:02, 3 April 2016 (diff | hist) . . (-1) . . CallSNPs.py (→5. Intersect samples' features to find common features set)
- 13:05, 3 April 2016 (diff | hist) . . (-10) . . CallSNPs.py (→5. Intersect samples' fecture to find common features they all share)
- 13:05, 3 April 2016 (diff | hist) . . (+50) . . CallSNPs.py
- 13:03, 3 April 2016 (diff | hist) . . (+117) . . CallSNPs.py
- 13:00, 3 April 2016 (diff | hist) . . (+215) . . CallSNPs.py
- 12:24, 3 April 2016 (diff | hist) . . (+66) . . CallSNPs.py
- 23:35, 2 April 2016 (diff | hist) . . (+4) . . CallSNPs.py
- 23:26, 2 April 2016 (diff | hist) . . (+135) . . CallSNPs.py
- 23:21, 2 April 2016 (diff | hist) . . (0) . . CallSNPs.py
- 23:20, 2 April 2016 (diff | hist) . . (+131) . . CallSNPs.py
- 23:13, 2 April 2016 (diff | hist) . . (+282) . . CallSNPs.py
- 23:04, 2 April 2016 (diff | hist) . . (+130) . . CallSNPs.py (later)
- 22:18, 2 April 2016 (diff | hist) . . (+2) . . CallSNPs.py
- 22:16, 2 April 2016 (diff | hist) . . (0) . . CallSNPs.py
- 22:15, 2 April 2016 (diff | hist) . . (+8) . . CallSNPs.py
- 22:07, 2 April 2016 (diff | hist) . . (+14) . . CallSNPs.py
- 21:43, 2 April 2016 (diff | hist) . . (0) . . CallSNPs.py
- 14:50, 2 April 2016 (diff | hist) . . (+6) . . CallSNPs.py
- 14:50, 2 April 2016 (diff | hist) . . (+292) . . CallSNPs.py
- 18:24, 1 April 2016 (diff | hist) . . (+248) . . CallSNPs.py
- 17:50, 1 April 2016 (diff | hist) . . (+326) . . CallSNPs.py
- 17:16, 1 April 2016 (diff | hist) . . (+198) . . CallSNPs.py
- 17:10, 1 April 2016 (diff | hist) . . (+2) . . CallSNPs.py
- 16:53, 1 April 2016 (diff | hist) . . (+25) . . CallSNPs.py
- 16:50, 1 April 2016 (diff | hist) . . (-14) . . CallSNPs.py
- 16:49, 1 April 2016 (diff | hist) . . (-4) . . CallSNPs.py
- 16:48, 1 April 2016 (diff | hist) . . (+2) . . CallSNPs.py
- 16:48, 1 April 2016 (diff | hist) . . (+245) . . CallSNPs.py
- 16:41, 1 April 2016 (diff | hist) . . (+446) . . N CallSNPs.py (Created page with "This script is part of "script_tools" modules. It requires an alignment in the shape of the base reference sequence and the bam files of the short read aligned to that sequen...")
- 16:24, 1 April 2016 (diff | hist) . . (+37) . . Main Page
- 18:36, 31 March 2016 (diff | hist) . . (+157) . . N Bowtie2 (Created page with "= Introduction = = Install notes = * version 2.2.4 and upwards seem to use a new executable style whereby there is a principal bowtie2 executable and then") (current)
- 17:55, 31 March 2016 (diff | hist) . . (+14) . . Main Page
- 17:50, 31 March 2016 (diff | hist) . . (0) . . Srst2
- 17:46, 31 March 2016 (diff | hist) . . (+321) . . N Srst2 (Created page with "=introduction= This python based tool with two main dependencies (samtools and bowtie2) carries out mapping of short reads to detect overall three targets: 1) genes 2) allel...")
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