Stacks

From wiki
Revision as of 12:53, 19 April 2016 by Rf (talk | contribs)
Jump to: navigation, search

Dominant Radseq analysis software protocol by Julian Catchen.

Steps

  • create database
  • ensure $STACKSROOTDIR/share/stacks/sql/my.cnf is set up properly
  • ensure modification privileges for the user
  • load stack.sql schema onto the database. It's in $STACKSROOTDIR/share/stacks/sql/stacks.sql, i.e.
mysql <mydbname> -h <name_of_server_running_mysql> -u <myusername> -p < $STACKSROOTDIR/share/stacks/sql/stacks.sql
Retrieved from "http://stab.st-andrews.ac.uk/wiki/index.php?title=Stacks&oldid=132"