Difference between revisions of "PGAP"

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Revision as of 15:40, 6 May 2016

Introduction

Usage

Step 3 Running PGAP

For PAGP, there are five functional modules:

  • cluster analysis of functional genes
  • pan-genome profile analysis
  • genetic variation analysis of functional genes
  • species evolution analysis
  • function enrichment analysis of gene clusters

The following commands could trigger all these analysis modules with the default parameters.