Difference between revisions of "Biotime machine"

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Line 9: Line 9:
 
  # Server Configuration File
 
  # Server Configuration File
 
  rsession-which-r=/usr/local/bin/R
 
  rsession-which-r=/usr/local/bin/R
 +
 +
= Administration =
 +
 +
The executable is '''rstudio-server'''. For example to kill a certain session:
 +
 +
rstudio-server force-suspend-session <PID>
  
 
= Memory-style errors =
 
= Memory-style errors =

Revision as of 13:38, 17 October 2017


R installation

R-3.4.1 was installed in /usr/local/bin. Rstudio is told to use this version via:

cat /etc/rstudio/rserver.conf

# Server Configuration File
rsession-which-r=/usr/local/bin/R

Administration

The executable is rstudio-server. For example to kill a certain session:

rstudio-server force-suspend-session <PID>

Memory-style errors

These used to happen quite often with marvin.

nutria@biotime:/mnt/rdrive/Bioinformatics$
Message from syslogd@biotime at Apr  3 14:56:59 ...
 kernel:[5173414.766503] [Hardware Error]: Corrected error, no action required.

Message from syslogd@biotime at Apr  3 14:56:59 ...
 kernel:[5173414.766566] [Hardware Error]: CPU:24 (15:2:0) MC4_STATUS[-|CE|MiscV|-|AddrV|-|Poison|CECC]: 0x9c664880011c017b

Message from syslogd@biotime at Apr  3 14:56:59 ...
 kernel:[5173414.766664] [Hardware Error]: MC4_ADDR: 0x0000003a066ab700 

Message from syslogd@biotime at Apr  3 14:56:59 ...
 kernel:[5173414.766712] [Hardware Error]: MC4 Error (node 3): L3 data cache ECC error.

Message from syslogd@biotime at Apr  3 14:56:59 ...
 kernel:[5173414.766767] [Hardware Error]: cache level: L3/GEN, tx: GEN, mem-tx: EV