Difference between revisions of "Mega"
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= Introduction = | = Introduction = | ||
| − | This program is also called '''megacc''', the "cc" | + | This program is also called '''megacc''', the "cc" standing for "Computational Core" |
| − | A preparatory step is required for the configuration of the analysis, facilitated by the program '''megaproto'''. | + | = Usage = |
| + | |||
| + | A preparatory step is required for the configuration of the analysis, facilitated by the program '''megaproto'''. This is done via a Graphical User Interface. It produces a '''mao''' file which must then be fed to the main megacc program via the '''-a''' option. | ||
| + | |||
| + | A main run of the progra is as follows: | ||
| + | |||
| + | megacc -a reltime_ml_nucleotide.mao -d Examples/mtCDNA.meg -t Examples/mtCDNA.nwk -g groups.txt -c Examples/mtCDNACalibration.txt -o timetree.demo | ||
| + | |||
| + | = Links = | ||
| + | |||
| + | [http://www.megasoftware.net/pdfs/MEGA7-CC-Quick-Start-Tutorial.pdf tutorial in PDF format] | ||
Latest revision as of 14:28, 19 December 2016
Introduction
This program is also called megacc, the "cc" standing for "Computational Core"
Usage
A preparatory step is required for the configuration of the analysis, facilitated by the program megaproto. This is done via a Graphical User Interface. It produces a mao file which must then be fed to the main megacc program via the -a option.
A main run of the progra is as follows:
megacc -a reltime_ml_nucleotide.mao -d Examples/mtCDNA.meg -t Examples/mtCDNA.nwk -g groups.txt -c Examples/mtCDNACalibration.txt -o timetree.demo
