Difference between revisions of "Ariba"
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= Introduction = | = Introduction = | ||
| + | Antimicrobial resistance software | ||
| + | = Testing and usage = | ||
| + | ariba getref card out.card | ||
| + | ariba prepareref -f out.card.fa -m out.card.tsv out.card.prepareref | ||
| + | ariba run out.card.prepareref reads1.fastq reads2.fastq out.run | ||
| + | |||
| + | Last line will fail because the reads are not provided. | ||
= Links = | = Links = | ||
| + | |||
| + | * [https://github.com/sanger-pathogens/ariba/wiki Homepage] of the project. | ||
Latest revision as of 12:44, 27 March 2017
Introduction
Antimicrobial resistance software
Testing and usage
ariba getref card out.card ariba prepareref -f out.card.fa -m out.card.tsv out.card.prepareref ariba run out.card.prepareref reads1.fastq reads2.fastq out.run
Last line will fail because the reads are not provided.
Links
- Homepage of the project.
