Difference between revisions of "Augustus"
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Worthy gene prediction program from Mario Stanke at Greifenswald. | Worthy gene prediction program from Mario Stanke at Greifenswald. | ||
| + | |||
| + | = Contents = | ||
| + | |||
| + | Augustus has many script available, and several executables besides the main "augustus" executable. | ||
| + | |||
| + | It also has a config directory available through the environmental variable '''$AUGUSTUS_CONFIG_DIR''' | ||
| + | |||
= Admin notes only= | = Admin notes only= | ||
== Compilation == | == Compilation == | ||
| + | |||
Is a simple "make" but the Makefiles (especially the ne inside "src") need heavy editing. | Is a simple "make" but the Makefiles (especially the ne inside "src") need heavy editing. | ||
| + | |||
| + | filterBam particularly | ||
colamd, got rid of this. | colamd, got rid of this. | ||
Revision as of 17:29, 26 July 2016
Introduction
Worthy gene prediction program from Mario Stanke at Greifenswald.
Contents
Augustus has many script available, and several executables besides the main "augustus" executable.
It also has a config directory available through the environmental variable $AUGUSTUS_CONFIG_DIR
Admin notes only
Compilation
Is a simple "make" but the Makefiles (especially the ne inside "src") need heavy editing.
filterBam particularly
colamd, got rid of this.
