Difference between revisions of "SNP Analysis and phylogenetics"
(Created page with " = Links = == Andrew Rambaut = [https://groups.google.com/forum/#!topic/beast-users/V5vRghILMfw Says] that") |
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| + | = Introduction = | ||
| + | Phylogenies have typically be inferred from gene sequences where both variant AND invariant sites are included. | ||
| + | When constructing trees from SNP analyses, what we have is an account of variant sites only. | ||
= Links = | = Links = | ||
| − | == Andrew Rambaut = | + | == Andrew Rambaut suggestion== |
| − | [https://groups.google.com/forum/#!topic/beast-users/V5vRghILMfw | + | Is to introduce the number of invariant sites in the shape of counts for each of the four bases. His post is [https://groups.google.com/forum/#!topic/beast-users/V5vRghILMfw here]. |
Revision as of 13:19, 4 July 2017
Introduction
Phylogenies have typically be inferred from gene sequences where both variant AND invariant sites are included.
When constructing trees from SNP analyses, what we have is an account of variant sites only.
Links
Andrew Rambaut suggestion
Is to introduce the number of invariant sites in the shape of counts for each of the four bases. His post is here.
