New schedule - Revision history

Rf at 22:41, 5 October 2016

2016-10-05T22:41:04Z

Rf at 22:39, 5 October 2016

2016-10-05T22:39:13Z

Rf at 16:42, 4 October 2016

2016-10-04T16:42:42Z

Rf at 16:42, 4 October 2016

2016-10-04T16:42:31Z

Rf: Created page with "= Part 1, 90mins., before morning coffee= = Introduction = * Main and support instructors * Each participant * Aims and scope * Challenges of bioinformatics and genomics ==..."

2016-10-03T12:07:06Z

Created page with "= Part 1, 90mins., before morning coffee= = Introduction = * Main and support instructors * Each participant * Aims and scope * Challenges of bioinformatics and genomics ==..."

New page

= Part 1, 90mins., before morning coffee=

= Introduction =
* Main and support instructors
* Each participant
* Aims and scope
* Challenges of bioinformatics and genomics

== History of Unix ==
* First 5 minutes of time sharing footage
* How Unix history has shaped its character
* How this nature might help meet current challenges

= Accessing terminal =
* Logging on to Windows with University ID
* Finding PuTTY (locally or through Apps Anywhere)
==Details for PuTTY details ==
* Server 138.251.13.131 or marvin.st-andrews.ac.uk, port 22, SSH.
* Data: <username>
* Terminal keyboard: VT100+
* Saved session: enter name, save
* Connection|Data

@@ Line 1: / Line 1: @@
-Session 1, 90mins., before morning coffee
+= Session 1, 90mins., before morning coffee =
-Introduction (15mins)
+== Introduction (15mins) ==
-*  Main and support instructors
+* Main and support instructors
-*  Each participant
+* Each participant
-*  Aims and scope
+* Aims and scope
-*  Challenges of bioinformatics and genomics
+* Challenges of bioinformatics and genomics
-History of Unix (30mins)
+== History of Unix (30mins) ==
 * First 5 minutes of time sharing footage
@@ Line 19: / Line 17: @@
 * How this nature might help meet current challenges
-Accessing terminal (15mins)
+== Accessing terminal (15mins) ==
 * Logging on to Windows with University ID
 * Finding PuTTY (locally or through Apps Anywhere)
-### Procedure for PuTTY
+=== Procedure for PuTTY ===
 * Server 138.251.13.131 or marvin.st-andrews.ac.uk, port 22, SSH.
@@ Line 31: / Line 28: @@
 * Connection | Data | Auto-login username: <username>
 * Saved session: enter any chosen name, save
-* "Connect"
+* &quot;Connect&quot;
-* PuTTY Security Alert "The server's host key is not cached in the registry": click "yes"
+* PuTTY Security Alert &quot;The server's host key is not cached in the registry&quot;: click &quot;yes&quot;
-* Once in, type "fortune" to see if keyboard is OK.
+* Once in, type &quot;fortune&quot; to see if keyboard is OK.
-* First operation will be ... to get out again! Type "exit" or "logout"
+* First operation will be ... to get out again! Type &quot;exit&quot; or &quot;logout&quot;
 * This gets us back to Windows
 * Also logout of Windows (Apps Anywhere also seems to have a logout procedure)
 * Then repeat the entire procedure
-Quiz
+== Quiz ==
-Session 2, 90mins., 11am to 12:30
+= Session 2, 90mins., 11am to 12:30 =
 * The first part of course runthough. It's likely this will spill over into Session 3
-Session 3, 90mins., 13:30 to 15:00
+= Session 3, 90mins., 13:30 to 15:00 =
 * Spill over from Course Runthrough (30 mins)
 * This part will be anchored by a Vim presentation
-Session 4, 90mins., 15:30 to 17:00
+= Session 4, 90mins., 15:30 to 17:00 =
 * This is for advanced tools: mostly about awk and bioawk. Using various file formats.

@@ Line 10: / Line 10: @@
 * First 5 minutes of time sharing footage
 * How Unix history has shaped its character
-* How this nature might help meet current Genomic challenges
+* How this nature might help meet current genomic challenges
 = Accessing terminal =