Difference between revisions of "ViennaRNA"

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(Created page with "= Introduction = Quite a large software package for dealing with RNA and RNA structure = Installation = ViennaRNA has a perl interface as well as a python interface for bot...")
 
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Quite a large software package for dealing with RNA and RNA structure
 
Quite a large software package for dealing with RNA and RNA structure
 +
 +
Here are the executables that it installs:
 +
 +
* RNAfold
 +
* RNAeval
 +
* RNAheat
 +
* RNApdist
 +
* RNAdistance
 +
* RNAinverse
 +
* RNAplot
 +
* RNAsubopt
 +
* RNALfold
 +
* RNAcofold
 +
* RNApaln
 +
* RNAduplex
 +
* RNAalifold
 +
* RNAplfold
 +
* RNAup
 +
* RNAaliduplex
 +
* RNALalifold
 +
* RNA2Dfold
 +
* RNAparconv
 +
* RNAPKplex
 +
* RNAplex
 +
* RNAsnoop
 +
* RNApvmin
 +
* b2ct
 +
* popt
 +
* ct2db
 +
* Kinfold
 +
* RNAforester
 +
* RNAlocmin
  
 
= Installation =
 
= Installation =
  
 
ViennaRNA has a perl interface as well as a python interface for both pythons, version 2 and version 3.
 
ViennaRNA has a perl interface as well as a python interface for both pythons, version 2 and version 3.

Revision as of 11:19, 5 October 2017

Introduction

Quite a large software package for dealing with RNA and RNA structure

Here are the executables that it installs:

  • RNAfold
  • RNAeval
  • RNAheat
  • RNApdist
  • RNAdistance
  • RNAinverse
  • RNAplot
  • RNAsubopt
  • RNALfold
  • RNAcofold
  • RNApaln
  • RNAduplex
  • RNAalifold
  • RNAplfold
  • RNAup
  • RNAaliduplex
  • RNALalifold
  • RNA2Dfold
  • RNAparconv
  • RNAPKplex
  • RNAplex
  • RNAsnoop
  • RNApvmin
  • b2ct
  • popt
  • ct2db
  • Kinfold
  • RNAforester
  • RNAlocmin

Installation

ViennaRNA has a perl interface as well as a python interface for both pythons, version 2 and version 3.