Submit a job and monitor queues

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Revision as of 12:27, 6 May 2020 by PeterThorpe (talk | contribs) (Created page with " == submit a job == to submit a shell which contains are the needed flags in the file. sbatch spades.sh ==Show information on the queues:== smap squeue (show the queue...")
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submit a job

to submit a shell which contains are the needed flags in the file.

sbatch spades.sh


Show information on the queues:

smap
squeue  (show the queue)
squeue –p bigmem  (show the queue for big mem)
sview

Interactive mode (like qrsh):

srun --pty bash -p bigmem           (Bioinf user : use the bigmem q)