Difference between revisions of "Quast"
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Revision as of 14:40, 6 February 2017
Introduction
Quast is a software package that assesses genome assemblies. It is developed by the group that develops SPAdes.
Usage
To load:
module load quast
An example run:
quast.py test_data/contigs_1.fasta test_data/contigs_2.fasta -R test_data/reference.fasta.gz -G test_data/genes.gff
