Difference between revisions of "Qualimap"
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* NOISeq, Repitools, Rsamtools, GenomicFeatures, rtracklayer (available from Bioconductor) | * NOISeq, Repitools, Rsamtools, GenomicFeatures, rtracklayer (available from Bioconductor) | ||
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| + | * [http://qualimap.bioinfo.cipf.es/doc_html/intro.html#citing-qualimap homepage] | ||
Revision as of 15:40, 26 April 2017
Introduction
Inspecting bam files for quality. Comes from same home as Blast2Go, the famous functional annotation system, in CIPF, Valencia, Spain.
Installation
Has a number of dependencies:
- optparse (available from CRAN)
- NOISeq, Repitools, Rsamtools, GenomicFeatures, rtracklayer (available from Bioconductor)
