Difference between revisions of "Last"

From wiki
Jump to: navigation, search
(Created page with "= Introduction = An aligner that is insensitive to repeat regions. This makes it suitable for mapping sequences against entire genomes. Its chief usage idea is that of not...")
 
 
Line 6: Line 6:
  
 
Its chief usage idea is that of not requiring repeat-masking.
 
Its chief usage idea is that of not requiring repeat-masking.
 +
 +
= List of executables =
 +
 +
* last-split
 +
* last-pair-probs
 +
* last-merge-batches
 +
* lastdb8
 +
* lastdb
 +
* lastal
 +
* parallel-fastq
 +
*parallel-fasta
 +
* maf-swap
 +
* maf-sort
 +
* maf-join
 +
* maf-convert
 +
* last-train
 +
* last-split8
 +
* last-postmask
 +
* last-map-probs
 +
* last-dotplot
 +
* lastal8
 +
* fastq-interleave

Latest revision as of 11:01, 13 March 2017

Introduction

An aligner that is insensitive to repeat regions.

This makes it suitable for mapping sequences against entire genomes.

Its chief usage idea is that of not requiring repeat-masking.

List of executables

  • last-split
  • last-pair-probs
  • last-merge-batches
  • lastdb8
  • lastdb
  • lastal
  • parallel-fastq
  • parallel-fasta
  • maf-swap
  • maf-sort
  • maf-join
  • maf-convert
  • last-train
  • last-split8
  • last-postmask
  • last-map-probs
  • last-dotplot
  • lastal8
  • fastq-interleave