Difference between revisions of "Installing software on marvin"
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Revision as of 16:45, 23 January 2018
Installing software on Marvin/Module
Software needs to be installed in:
/usr/local/Modules/modulefiles/tools/<software name>/<version number>/
to make use of the modules feature.
The text files that tells modules that the software is there are located in:
/usr/local/Modules/3.2.10/modulefiles/<software>/<version number>
An example of which is below:
#%Module1.0##################################################################### ## ## proc ModulesHelp { } { puts stderr "\tStacks - loads Stacks 2.0Beta7c software \tSoftware available: \tcstacks \testacks \thstacks \tpstacks \trxstacks \tsstacks \tustacks " } module-whatis "loads Stacks version 1.41 software" module load perl samtools/0.1.19b sparsehash # for Tcl script use only set version 2.0Beta7c set prefix /usr/local/Modules/modulefiles/tools/stacks/${version} set sys linux64 setenv STACKSROOTDIR ${prefix} prepend-path PATH ${prefix}/bin