Difference between revisions of "Augustus"

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Worthy gene prediction program from Mario Stanke at Greifenswald.
 
Worthy gene prediction program from Mario Stanke at Greifenswald.
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= Contents =
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Augustus has many script available, and several executables besides the main "augustus" executable.
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It also has a config directory available through the environmental variable '''$AUGUSTUS_CONFIG_DIR'''
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= Admin notes only=
 
= Admin notes only=
  
 
== Compilation ==
 
== Compilation ==
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Is a simple "make" but the Makefiles (especially the ne inside "src") need heavy editing.
 
Is a simple "make" but the Makefiles (especially the ne inside "src") need heavy editing.
 +
 +
filterBam particularly
  
 
colamd, got rid of this.
 
colamd, got rid of this.

Revision as of 17:29, 26 July 2016

Introduction

Worthy gene prediction program from Mario Stanke at Greifenswald.

Contents

Augustus has many script available, and several executables besides the main "augustus" executable.

It also has a config directory available through the environmental variable $AUGUSTUS_CONFIG_DIR


Admin notes only

Compilation

Is a simple "make" but the Makefiles (especially the ne inside "src") need heavy editing.

filterBam particularly

colamd, got rid of this.