Last

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Introduction

An aligner that is insensitive to repeat regions.

This makes it suitable for mapping sequences against entire genomes.

Its chief usage idea is that of not requiring repeat-masking.

List of executables

  • last-split
  • last-pair-probs
  • last-merge-batches
  • lastdb8
  • lastdb
  • lastal
  • parallel-fastq
  • parallel-fasta
  • maf-swap
  • maf-sort
  • maf-join
  • maf-convert
  • last-train
  • last-split8
  • last-postmask
  • last-map-probs
  • last-dotplot
  • lastal8
  • fastq-interleave
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