Staphylococcus Epidermidis Samples, Run 59

Dated 14/09/2016

Sequence types, all 8 samples conform to the same:

SampleSTarcCaroEgtrmutSpyrRtpiAyqiLmismatchesuncertaintydepthmaxMAFBlaZ_BlaDfrC_TmtMECA_Bla
14-2024-W271224110-93.39128571430.109243697479BlaZ_1476*DfrC_1576*MECA_1491
14-2025-A271224110-128.7760.14606741573Aac6-Aph2_1686BlaZ_1476*DfrC_1576*MECA_1491
14-2026-C1271224110-89.3040.0902255639098Aac6-Aph2_1686AphA2_1492*?BlaZ_1476*DfrC_1576*MECA_1491
14-2026-C2271224110-138.1285714290.100917431193BlaZ_1476*?DfrC_1576*MECA_1491
14-2072-B271224110-132.0354285710.135Aac6-Aph2_1686BlaZ_1476*DfrC_1576*MECA_1491MsrA_297
14-2073-X271224110-118.3934285710.125Aac6-Aph2_1686BlaZ_1476*DfrC_1576*MsrA_297
14-2098-W271224110-157.8288571430.0960698689956Aac6-Aph2_1686BlaZ_1476*?DfrC_1576*MECA_1491MsrA_297
14-2841-B271224110-147.5942857140.104651162791Aac6-Aph2_1686*?BlaZ_1476*DfrC_1576*MsrA_297

Gubbins-derived tree, after SNPCallPhylo analysis

Note: the reference (ATCC12228) has been deleted from the tree to show differential resolution between the samples. Their distance from the samples is in the order of 20000.